Subset: Sequencing
MIxS terms related to the sequencing stage of nucleic acid sequencing data generation.
URI: Sequencing
Slots in subset
| Slot | Description |
|---|---|
| capt_pcr_cyc_tot | Amplification cycles after capture enrichment total |
| capt_probe_desc | Description of target enrichment probe designs used (e |
| capt_probe_src_taxid | NCBI taxon ID(s) of all organisms included in the baits of a whole organelle ... |
| damage_treatment | Indication of whether characteristic ancient DNA damage has been altered or r... |
| data_preproc_desc | Description of preprocessing performed on the reads in the sequencing data fi... |
| lib_gener_technique | The technique used to generate the library, i |
| lib_mid_desc | Index/barcode/primer configuration used during library building for sequencin... |
| lib_polymerase | The polymerase enzyme used for building nucleic acid libraries |
| lib_strandedness | The strandedness of the original template nucleic acid molecules used for con... |
| library_name | Any ID or name used for referring to a nucleic acid sequencing library associ... |
| reads_removed_desc | Specify whether associated data was filtered in some form prior to upload, su... |
| reamp_pcr_cyc_tot | Number of amplification cycles after library indexing PCR |
| sop | Standard operating procedures used to generate genomes, metagenomes or enviro... |
| sop_lib_preparation | Citation(s) for the nucleic acid library preparation protocol |